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Business model

"I run two brands on Shopify and wholesale, with two warehouses and a 3PL. What system do I need?"

You need one system that owns inventory and orders for both brands, with each brand's Shopify store, wholesale channel and warehouse plugged into it. The real decision isn't which tool. It's how the brands are separated inside that system: as labels in one company, or as separate companies. Here's how each works, how a dress brand and a jeans brand would actually be set up, and what to check before you buy.

36Divisions (brands or labels) as standard
30+Warehouses with a prebuilt 3PL connection
350+Retailers on built-in EDI
40+Years building ERP, since 1984
The short answer

Can one ERP run two brands on Shopify and wholesale?

Yes. Put both brands in one ERP that owns inventory and orders, connect each brand's Shopify store to it, and route wholesale, EDI and warehouse work through the same record. In AIMS360 each brand is either a division inside one company, sharing customers, stock, warehouses and one set of books, or its own company on the multi-entity add-on, with separated accounting and consolidated reporting. Both setups run on the same platform.

Either way, every order from every store, marketplace, rep and retailer lands in one order book, every warehouse and 3PL is a stocking location, and you can read sales, margin, stock and receivables per brand.

What usually breaks first isn't the second brand. It's the second Shopify store. Two stores, a wholesale platform and a 3PL each keep their own idea of what's available, and nobody can say which number is right. One system has to be the arbiter, and that system has to know which brand every style belongs to.

The setup decision

Divisions or separate companies: two ways to run multiple brands

It's your choice, and most brands know the answer once they ask one question: do these brands share one set of books?

  Brands as divisions, one company Brands as separate companies
What it is A label split inside one company file. Every style belongs to exactly one division Each brand is its own company on one AIMS360 platform, through the multi-entity add-on
Books One chart of accounts and one closing date Separated accounting per company
Customers One customer list shared by both brands Shared customer base across companies
Inventory and warehouses One inventory and one set of warehouses; each style carries its brand Set per company during implementation
Reporting Sales, margin, WIP, stock and receivables by division Consolidated reporting across companies
Paperwork Each label's name prints on its order confirmations and invoices when forms use a text return address Each company has its own forms
Pricing 36 divisions as standard; more can be licensed Additional company priced per company
Usually fits One legal entity selling under two or more labels Separate legal entities, separate owners or lenders, or a brand you may sell one day

Your accountant should make the entity call. The software follows it. For the mechanics of divisions, including reps by division and division reporting, see multi-currency and divisions. Pricing for an additional company is on the pricing page.

Shopify

One Shopify store or one per brand? Both connect to the same record

Plenty of brands start with one combined store and split later. AIMS360 handles either.

One store per brand

Each Shopify store is its own named connection to the same AIMS360 company. You decide which styles go to which store, so the dress store lists dresses and the denim store lists denim. Orders from both land in one order book.

One combined store

Both brands sell from one storefront. A cart can hold a dress and a pair of jeans, and the order imports as one order. Each line still reports to its own brand, because the brand lives on the style.

Per store, you choose whether it shares the main stock pool or draws from a warehouse of its own. Every Shopify location, whether a warehouse, a 3PL or a retail door, maps to its own AIMS360 warehouse, and transfers between locations update both systems. If you run Shopify POS in a store, the register is one more channel on the same record.

What protects wholesale is the availability rule. Stock committed to wholesale and EDI can sit in its own virtual warehouse, so each Shopify store sees the direct to consumer remainder and nothing a retailer already bought. Or run one shared pool if your wholesale ships from separate production. The full mechanics are on the Shopify integration page.

Wholesale

Wholesale, reps and B2B platforms per brand

  • B2B platforms: if each brand has its own JOOR storefront, orders from all of them import into one AIMS360 order book, with customers, products and order numbers. See multiple JOOR brands in one ERP. NuORDER, RepSpark, Brandboom, Faire and FashionGo connect too.
  • Sales reps by division: a store that buys both labels can have a different rep for each, on the same customer account. The rep who sells denim is paid on denim, and the commission follows.
  • Your own buyer portal: existing accounts can order through the WebLink B2B portal, and reps can write orders on the RemoteLink app. Both feed the same order book. See B2B order management.
  • One allocation: wholesale, rep, marketplace and Shopify orders all commit stock from one record, so a size can't be sold twice across brands or channels. See omnichannel order management.
Warehouses

Two warehouses and a 3PL on one stock record

Your own building, a second building and a 3PL are all just warehouses in AIMS360. So is a retail store, a showroom, or a virtual warehouse that holds stock apart from general availability. Brand and warehouse are independent: a division says whose style it is, a warehouse says where it sits.

Question How AIMS360 handles it
Which warehouse ships an order? The customer record sets the default. It can be confirmed on the order, or changed line by line when an order ships from two places
Can one brand live in one place? Yes. Since September 2026 you can choose which warehouses each style and color may be stocked in, so searches, scanning and inventory screens show it where it belongs
Moving stock between buildings Recorded as a transfer, so both locations stay true. On the floor, scan and transfer from a handheld
The 3PL Connected by EDI or API. More than 30 warehouses already have a prebuilt connection, and you can run more than one 3PL at once
Your own building The AIMS360 WMS with bin locations, scanning and pick paths, side by side with the 3PL
Reporting Stock and open to sell by warehouse, by brand, or both

A common shape: bulk wholesale out of your own building, e-commerce out of a 3PL. More on the multi-warehouse page and the 3PL integrations page.

Retailers

Retailer EDI when both brands sell to the same stores

EDI is built into AIMS360 for 350+ retailers. When a retailer buys both labels, its purchase orders can map to the right brand by the department number on the 850, and the GS1-128 carton label prints that department number and the division name.

EDI is billed as a flat monthly fee per retailer with unlimited transactions, so a second brand's purchase orders don't add document charges. Start with EDI retailers or how EDI works in AIMS360.

Worked example

A dress brand and a jeans brand: how the setup looks

One company, two labels, Shopify DTC and wholesale for each, your own warehouse plus a 3PL. This is an example configuration; yours is set during implementation.

Piece Dress brand Jeans brand
Division Dresses Denim
Shopify Dress store, dress styles exported to it Denim store, denim styles exported to it
Wholesale JOOR storefront, boutique accounts JOOR storefront, retailer EDI
Reps Womenswear rep Denim rep, on the same shared accounts
Where stock sits Your own warehouse on the AIMS360 WMS Wholesale at your warehouse, e-commerce at the 3PL
What Shopify sees The direct to consumer remainder, after wholesale and EDI commitments are held back
Books and reports One set of books, with sales, margin, WIP, stock and receivables read per division

The order, in sequence

A denim order arrives from the denim Shopify store, a dress order from JOOR, a PO from a retailer over EDI
↓ all three land in one order book, each line tagged to its brand by the style
Stock is committed from the right warehouse: the customer's default, or per line
↓
Your warehouse gets a pick ticket; the 3PL gets the order by EDI or API
↓
Shipment and tracking post back, the invoice follows the shipment
↓
Each Shopify store's available number updates, and the brand reports update with it

If the jeans brand were its own LLC with its own lender, the same picture holds, except denim runs as a second company with its own books, and you read both together through consolidated reporting.

Worth knowing

Five things to decide before you set it up

  • Entity first. Same books, use divisions. Separate books, use separate companies. Decide this with your accountant before data moves.
  • Which styles go to which store. Export to Shopify is per connection and fully in your control, so agree the rule up front, especially for shared basics.
  • Shared or separated stock pools. If both brands ship wholesale and DTC from one building, separate pools keep retailer orders safe from the storefront.
  • Where each brand's stock may live. Use inventory locations per style if one brand never touches the 3PL, so pickers and scanners can't pull it from the wrong place.
  • Each store is its own connection. E-commerce integrations are quoted per site, so a second Shopify store is a line on your quote.

Running one brand today? The single-brand version of this page is software for warehouse, Shopify and wholesale orders.

Proof

Brands running Shopify, wholesale and more than one line on AIMS360

  • Full Turn Custom Apparel: three distinct business lines on one connected stack, with no home-office headcount added in five years of growth.
  • Retrofête: Shopify DTC, JOOR wholesale and retailer EDI orders all pull from inventory at its 3PL, with AIMS360 managing receiving, orders and stock.
  • MISA Los Angeles: Shopify DTC, wholesale to 300+ stockists in 35 countries, a Palisades Village boutique and LA production on one inventory ledger.
  • Generation Love: its own e-commerce, Shopify POS in its boutiques and wholesale to Saks and Bloomingdale's read one stock record, with 10x faster inventory visibility.
  • LAPCOS: Shopify DTC plus wholesale to Urban Outfitters, CVS, PacSun and Faire, with production and QuickBooks on the same platform.

All of them are on the case studies page.

Questions

Multiple brands, Shopify and wholesale: common questions

An apparel ERP that owns inventory and orders for both brands, with each brand's Shopify store, wholesale platform and warehouse connected to it. In AIMS360 the brands run as divisions in one company or as separate companies, and every order from every channel lands in one order book with style, color and size inventory behind it.

The single-brand version of the question is covered in software for warehouse, Shopify and wholesale orders.

Either works with AIMS360. Separate stores give each brand its own storefront and customer experience; each store is its own named connection to the same AIMS360 company, and you choose which styles export to which store. One combined store also works, and an order holding both brands imports as one order with each line reporting to its own brand.

Details on the Shopify integration page.

If the brands share one legal entity and one set of books, divisions are the simpler setup: one customer list, one inventory, one chart of accounts, with reporting by division. If they are separate legal entities, have different owners or lenders, or one may be sold, separate companies on the multi-entity add-on keep the accounting apart while giving you consolidated reporting.

See how divisions work.

Yes. Brand and warehouse are independent in AIMS360, so both brands can stock the same building, or each can live in its own. Your own warehouse runs on the AIMS360 WMS, the 3PL connects by EDI or API, and you can choose which warehouses each style and color may be stocked in.

See multi-warehouse and 3PL integrations.

Hold wholesale and EDI commitments in their own virtual warehouse so each Shopify store sees the direct to consumer remainder. Change the allocation rule and the number Shopify sees changes with it. If your wholesale ships from separate production runs, a single shared pool works too.

More in omnichannel order management.

Yes. Every style belongs to one division, so cut and sold, margin by order, aged receivables and the Order, Invoice, WIP and Stock BI views all run by division. Since September 2026, A/R adjustments can carry a division too. With separate companies, consolidated reporting reads them together.

See reporting.

Yes. A customer account can carry a different rep per division, set on the customer, on the rep or in batch. Each order takes the rep for its division, and the commission calculation follows that rep.

See sales and reps.

The retailer's department number on the 850 purchase order can cross-reference to a division, and the GS1-128 carton label prints the department number and division name. EDI is built in for 350+ retailers, billed as a flat monthly fee per retailer with unlimited transactions.

See EDI retailers.

AIMS360 quotes every setup. 36 divisions come as standard, and more can be licensed. An additional company is an add-on priced per company. E-commerce integrations such as Shopify are priced per site, so each store is a line on the quote. Implementation is billed hourly and itemized before you sign.

See the pricing page.

It varies by vendor and plan. Uphance's help center, for example, says its multibrand feature is available on its Enterprise plan. Running two Shopify stores without an ERP usually means a multi-store sync app, which keeps Shopify stock in step but can't see wholesale, EDI or production orders. Ask every vendor to show two brands, two stores and a wholesale order on one screen.

For a wider comparison, see the Shopify ERP comparison.

Last reviewed October 29, 2026 by Shahrooz Kohan, CEO of AIMS360.

Describes a common operating pattern rather than a separate product. Your own configuration is set during implementation.

Next step

Bring both brands, not a feature list

Tell us your brands, your Shopify stores, your wholesale channels and where each brand's stock sits. We'll map the setup live, divisions or companies, from order to shipment to invoice.